How to use the PhUSE Script Repository

The PhUSE Script Repository is hosted on, and much documentation exists on the full spectrum of GitHub functionality. As a short-cut to getting started viewing, downloading, and uploading scripts, take a look at this User Guide.

Repository Metadata

As more content is added to the repository, organization and user-friendliness becomes more of a challenge. If you are considering contributing a script to the PhUSE Script Repository or are interested in learning more about the Standard Analyses & Code Sharing Working Group’s efforts to address these challenges, watch this PhUSETube video on adding and using script metadata.

Test Dataset Factory

Essential to the development, testing, and sharing of industry standard scripts are suitable test data, and because even a single script qualification or validation effort can require multiple data scenarios, multiple test datasets need to be developed, perhaps someday even a “factory” that can generate test datasets according to user-entered settings.

The most recent versions of test datasets created by the Test Dataset Factory project of the Standard Analyses & Code Sharing PhUSE Working Group are listed below along with their user guides:

TDF_ADaM: ADaMIG v1.1 Test Datasets: User Guide | Zip File
TDF_SDTM: SDTMIG v3.2 Test Datasets: User Guide | Zip File